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Aanderud ZT, Shuldman MI, Drenovsky RE, Richards JH. 2008. Shrub-interspace dynamics alter relationships between microbial community composition and belowground ecosystem characteristics. Soil biology & Biochemistry 40: 2206-2216.

Aanderud ZT, Schoolmaster DR, Lennon JT. 2011. Plants Mediate the Sensitivity of Soil Respiration to Rainfall Variability. Ecosystems 14: 156-167.

Aanderud ZT, Lennon JT. 2011. Validation of Heavy-Water Stable Isotope Probing for the Characterization of Rapidly Responding Soil Bacteria. Applied and Environmental Microbiology 77: 4589-4596.

Aanderud, ZT, Jones SE, Schoolmaster DR, Fierer N, Lennon JT. 2013. Sensitivity of soil respiration and microbial communities to altered snowfall. Soil Biology & Biochemistry 57: 217-227.

Abbot P, et al. 2011. Inclusive fitness theory and eusociality. Nature 471: E1-E4.

Abraha M, Chen JQ, Chu HS, Zenone T, John R, Su YJ, Hamilton SK, Robertson GP. 2015. Evapotranspiration of annual and perennial biofuel crops in a variable climate. Global Change Biology Bioenergy 7: 1344-1356.

Abraha, M, Gelfand, I, Hamilton, SK, Shao, CL, Su, YJ, Robertson, GP, Chen, JQ.  2016. Ecosystem Water-Use Efficiency of Annual Corn and Perennial Grasslands: Contributions from Land-Use History and Species Composition. Ecosystems  19: 1001-1012.

Abraha M, Hamilton SK, Chen JQ, Robertson GP. 2018. Ecosystem carbon exchange on conversion of Conservation Reserve Program grasslands to annual and perennial cropping systems. Agricultural and Forest Meteorology 253: 151-160.

Abraha M, Gelfand I, Hamilton SK, Chen JQ, Robertson GP. 2018. Legacy effects of land use on soil nitrous oxide emissions in annual crop and perennial grassland ecosystems. Ecological Applications 28: 1362-1369.

Agrawal AA, Conner JK, Johnson MTJ, Wallsgrove R. 2002. Ecological genetics of an induced plant defense against herbivores: Additive genetic variance and costs of phenotypic plasticity. Evolution 56: 2206-2213.

Agrawal AA, Kosola KR, Parry D. 2002. Gypsy moth defoliation and N fertilization affect hybrid poplar regeneration following coppicing. Canadian Journal of Forest Research 32: 1491-1495.

Agrawal AA, Conner J, Stinchcombe J. 2004. Evolution of plant resistance and tolerance to frost damage. Ecology Letters 7: 1199-1208.

Agrawal AA, et al. 2007. Filling key gaps in population and community ecology. . Frontiers in Ecology and the Environment 5: 145-152.

Agren J, Oakley CG, McKay JK, Lovell JT, Schemske DW. 2013. Genetic mapping of adaptation reveals fitness tradeoffs in Arabidopsis thaliana. Proceedings of the National Academy of Sciences of the United States of America 110: 21077-21082.

Agren J, Schemske DW. 2012. Reciprocal transplants demonstrate strong adaptive differentiation of the model organism Arabidopsis thaliana in its native range. New Phytologist 194: 1112-1122.

Agren J, Oakley CG, Lundemo S, Schemske DW. 2017. Adaptive divergence in flowering time among natural populations of Arabidopsis thaliana: Estimates of selection and QTL mapping. Evolution 71: 550-564.

Ahern RG, Landis DA, Reznicek AA, Schemske DW. 2010. Spread of exotic plants in the landscape: the role of time, growth habit, and history of invasiveness. Biological Invasions 12: 3157-3169.

Aiken RM, Smucker AJM. 1996. Root system regulation of whole plant growth. Annual Review Phytopathology 34: 325-347.

Akinnifesi FK, Smucker AJM, Kang BT. 1999. Below-ground dynamics in agroforestry systems. Annals of Arid Zone 38: 239-273.

Albarenque SM, Basso B, Caviglia OP, Melchiori RJM. 2016. Spatio-Temporal Nitrogen Fertilizer Response in Maize: Field Study and Modeling Approach. Agronomy Journal 108: 2110-2122.

Allen HL. 1967. Acetate utilization by heterotrophic bacteria in a pond. Hidrologiai Kozlony 7: 295-297.

—. 1968. Acetate in fresh water: natural substrate concentrations determined by dilution bioassay. Ecology 49: 346-349.

—. 1969. Chemo-organotrophic utilization of dissolved organic compounds by planktic algae and bacteria in a pond. Internationale Revue der Gesamten Hydrobiologie 54: 1-33.

—. 1971. Chemo-organotrophy in epiphytic bacteria with reference to macrophytic release of dissolved organic matter. Pages 277-280 in Cairns JJ, ed. Structure and Function of Freshwater Microbial Communities. Blacksburg, Virginia, USA: Virginia Polytechnic Institute and State University.

—. 1971. Primary productivity, chemo-organotrophy, and nutritional interactions of epiphytic algae and bacteria on macrophytes in the littoral of a lake. Ecological Monographs 41: 97-127.

Allen MR. 2010. Genetic and environmental factors influence survival and hatching of diapausing eggs. Limnology and Oceanography 55: 549-559.

Ambus P, Christensen S. 1995. Spatial and seasonal nitrous oxide and methane fluxes in Danish forest-, grassland-, and agroecosystems. Journal of Environmental Quality 24: 993-1001.

Ambus P, Robertson GP. 1998. Automated near-continuous measurement of carbon dioxide and nitrous oxide fluxes from soil. Soil Science Society of America 62: 394-400.

—. 1999. Fluxes of CH4 and N2O in aspen stands grown under ambient and twice-ambient CO2. Plant and Soil 209: 1-8.

Ambus P, Jensen ES, Robertson GP. 2001. Nitrous oxide and N-leaching losses from agricultural soil: influence of crop residue particle size, quality and placement. Phyton -Annales Rei Botanicae 41: 7-15.

Ambus P, Robertson GP. 2006. The Effect of increased N deposition on nitrous oxide, methane, and carbon dioxide fluxes from unmanaged forest and grassland communities in Michigan. Biogeochemistry 79: 315-337.

Angert AL, Bradshaw HD, Schemske DW. 2008. Using experimental evolution to investigate geographic range limits in monkeyflowers. Evolution 62: 2660-2675.

Annett CS, D’Itri FM. 1978. Mercury in fish and sediments in two eutrophic Michigan lakes with respect to time and urbanization. Pages 866-878 in Adriano DC, Brisbin IL, eds. Environmental Chemistry and Cycling Processes, vol. 45. Augusta, Georgia, USA: Savannah River Ecology Laboratory, Institute of Ecology, University of Georgia, Division of Biomedical and Environmental Research, Energy Research and Development Administration.

Antle JM, Basso B, Conant RT, Godfray HCJ, Jones JW, et al. 2017. Towards a new generation of agricultural system data, models and knowledge products: Design and improvement. Agricultural Systems 155: 255-268.

Arango CP, Tank JL, Johnson LT, Hamilton SK. 2008. Assimilatory uptake rather than nitrification and denitrification determines nitrogen removal patterns in streams of varying land use. Limnology and Oceanography 53: 2558-2572.

Asgari M, Steiner CF. 2017. Interactive effects of productivity and predation on zooplankton diversity. Oikos 126: 1617-1624.

Asseng S, et al. 2013. Uncertainty in simulating wheat yields under climate change. Nature Climate Change 3: 827-832.

Asseng S, et al. 2015. Rising temperatures reduce global wheat production. Nature Climate Change 5: 143-147.

Asseng S, Cammarano D, Basso B, Chung U, Alderman PD, et al. 2017. Hot spots of wheat yield decline with rising temperatures. Global Change Biology 23: 2464-2472.

Auld SKJR, Hall SR, Ochs JH, Sebastian M, Duffy MA. 2014. Predators and Patterns of Within-Host Growth Can Mediate Both Among-Host Competition and Evolution of Transmission Potential of Parasites. American Naturalist 184: S77-S90.

Austin EE, Wickings K, McDaniel MD, Robertson GP, Grandy AS. 2017. Cover crop root contributions to soil carbon in a no-till corn bioenergy cropping system. Global Change Biology Bioenergy 9: 1252-1263.

Ayres MP, Scriber JM. 1994. Local adaptations to regional climates in Papillo Canadersis Lepidoptera: Papollionidae. Ecological Monographs 64: 465-482.

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Bachmann MD, Carlton RG, Burkholder JM, Wetzel RG. 1986. Symbiosis between salamander eggs and green algae: microelectrode measurements inside eggs demonstrate effect of photosynthesis on oxygen concentration. Canadian Journal of Zoology 64: 1586-1588.

Baird IE, Wetzel RG. 1968. A method for the determination of zero thickness activity of 14C labeled benthic diatoms in sand. Limnology and Oceanography 13: 379-382.

Ball BA, et al. 2010. Direct and Terrestrial Vegetation-mediated Effects of Environmental Change on Aquatic Ecosystem Processes. Bioscience 60: 590-601.

Ballare, CL, Gross KL, Monson RK. 2013. Zooming in on plant interactions. Oecologia 171: 601-603.

Ballew, NG, Mittelbach, GG, Scribner, KT. 2017. Fitness Consequences of Boldness in Juvenile and Adult Largemouth Bass. American Naturalist. 189: 396-406.

Banovetz SJ, Scheiner SM. 1994. Effects of seed mass on the seed ecology of Coreopsis lanceolata. American Midland Naturalist 131: 65-74.

—. 1994. Secondary seed dormancy in Coreopsis lanceolata. American Midland Naturalist 131: 75-83.

Barko JW, Murphy PG, Wetzel RG. 1977. Investigation of primary production and ecosystem metabolism in a Lake Michigan dune pond. Archiv fur Hydrobiologie 81: 155-187.

Barnes JR, Ovink R, Cummins KW. 1978. Leaf litter processing in Gull Lake, Michigan, U.S.A. Verhandlungen. Internationale Vereinigung fur Theoretische und Angewandte Limnologie 20: 475-479.

Barton AD, AJ Pershing, E Litchman, NR Record, KF Edwards, ZV Finkel, T Kiørboe and BA Ward. 2013. The biogeography of marine plankton traits. Ecology Letters 16: 522-534.

Basso B, Ritchie JT. 2005. Impact of compost, manure and inorganic fertilizer on nitrate leaching and yield for a 6-year maize -alfalfa rotation in Michigan. Agriculture Ecosystems, and the Environment 108: 329-341.

Basso B, Gargiulo O, Paustian K, Robertson GP, Porter C, Grace PR, Jones JW. 2011. Procedures for Initializing Soil Organic Carbon Pools in the DSSAT-CENTURY Model for Agricultural Systems. Soil Science Society of American Journal 75: 69-78.

Basso B, Ritchie JT, Cammarano D, Sartori L. 2011. A strategic and tactical management approach to select optimal N fertilizer rates for wheat in a spatially variable field. European Journal of Agronomy 35: 215-222.

Basso B, Sartori L, Bertocco M, Cammarano D, Martin EC, Grace PR. 2011. Economic and environmental evaluation of site-specific tillage in a maize crop in NE Italy. European Journal of Agronomy 35: 83-92.

Basso B, Ritchie JT. 2012. Assessing the Impact of Management Strategies on Water Use Efficiency Using Soil-Plant-Atmosphere Models. Vadose Zone Journal 11.

Basso B, Fiorentino C, Cammarano D, Cafiero G, Dardanelli J. 2012. Analysis of rainfall distribution on spatial and temporal patterns of wheat yield in Mediterranean environment. European Journal of Agronomy 41: 52-65.

Basso B, Sartori L, Cammarano D, Fiorentino C, Grace PR, Fountas S, Sorensen CA. 2012. Environmental and economic evaluation of N fertilizer rates in a maize crop in Italy: A spatial and temporal analysis using crop models. Biosystems Engineering 113: 103-111.

Basso B, De Simone L, Cammarano D, Martin EC, Margiotta S, Grace PR, Yeh ML, Chou TY. 2012. Evaluating Responses to Land Degradation Mitigation Measures in Southern Italy. International Journal of Environmental Research 6: 367-380.

Basso B, Ritchie JT, Jones JW. 2012. On modeling approaches for effective assessment of hydrology of bioenergy crops: Comments on Le et al. (2011) Proc Natl Acad Sci USA 108:15085-15090. European Journal of Agronomy 38: 64-65.

Basso B, Cammarano D, Fiorentino C, Ritchie JT. 2013. Wheat yield response to spatially variable nitrogen fertilizer in Mediterranean environment. European Journal of Agronomy 51: 65-70.

Basso B, Ritchie J. 2014. Temperature and drought effects on maize yield. Nature Climate Change 4: 233.

Basso B, Hyndman DW, Kendall AD, Grace PR, Robertson GP. 2015. Can Impacts of Climate Change and Agricultural Adaptation Strategies Be Accurately Quantified if Crop Models Are Annually Re-Initialized? Plos One 10.

Basso B, Fiorentino C, Cammarano D, Schulthess U. 2016. Variable rate nitrogen fertilizer response in wheat using remote sensing. Precision Agriculture 17: 168-182.

Basso B, Dumont B, Cammarano D, Pezzuolo A, Marinello F, Sartori L. 2016. Environmental and economic benefits of variable rate nitrogen fertilization in a nitrate vulnerable zone. Science of the Total Environment 545: 227-235.

Basso B, Giola P, Dumont B, Migliorati MD, Cammarano D, Pruneddu G, Giunta F. 2016. Tradeoffs between Maize Silage Yield and Nitrate Leaching in a Mediterranean Nitrate-Vulnerable Zone under Current and Projected Climate Scenarios. Plos One 11.

Bassu S, et al. 2014. How do various maize crop models vary in their responses to climate change factors? Global Change Biology 20: 2301-2320.

Bayliss, SLJ, terHorst, CP, Lau, JA. 2017  Testing genotypic variation of an invasive plant species in response to soil disturbance and herbivory. Oecologia 183: 1135-1141.

Beaulieu JJ, Arango CP, Hamilton SK, Tank JL. 2008. The production and emission of nitrous oxide from headwater streams in the midwestern United States. Global Change Biology 14: 878-894.

Beaulieu JJ, et al. 2011. Nitrous oxide emission from denitrification in stream and river networks. Proceedings of the National Academy of Sciences of the United States of America 108: 214-219

Becker C, Boersma M. 2007. Effects of essential fatty acids on the reproduction of a generalist herbivore. Journal of Plankton Research 29: 463-470.

Beedy TL, Snapp SS, Akinnifesi FK, Sileshi GW. 2010. Impact of Gliricidia sepium intercropping on soil organic matter fractions in a maize-based cropping system. Agriculture, Ecosystems & Environment. 138: 139-146.

Beer S, Wetzel RG. 1981. Photosynthetic carbon metabolism in the submerged aquatic angiosperm Scirpus subterminalis. Plant Science Letters 21: 199-207.

Beer S, Stewart AJ, Wetzel RG. 1982. Measuring chlorophyll a and 14C-labeled photosynthate in aquatic angiosperms by the use of a tissue solubilizer. Plant Physiology 69: 54-57.

Beer S, Wetzel RG. 1982. Photosynthetic carbon fixation pathways in Zostera marina and three Florida seagrasses. Aquatic Botany 13: 141-146.

—. 1982. Photosynthesis in submersed macrophytes of a temperate lake. Plant Physiology 70: 488-492.

Bergsma TT, Bergsma QC, Ostrom NE, Robertson GP. 1999. A heuristic model for the calculation of dinitrogen and nitrous oxide flux for 15N-labeled soil. Soil Science Society of America Journal 63: 1709- 1716.

Bergsma TT, Ostrom NE, Emmons M, Robertson GP. 2001. Measuring simultaneous fluxes from soil of N2O and N2 in the field using the 15N-Gas “Nonequilibrium” technique. Environmental Science and Technology 35: 4307-4312.

Bergsma TT, Robertson GP, Ostrom NE. 2002. Influence of soil moisture and land use history on denitrification end-products. Journal of Environmental Quality 31: 711-717.

Berney MF, Bird GW. 1998. Nematodes. Pages 71-79 in Cavigelli M.A. DSR, Probyn L.K., Harwood R.R., ed. Michigan Field Crop Ecology, vol. E-2646. East Lansing, MI: Michigan State University Extension Bulletin.

Bernot MJ, et al. 2010. Inter-regional comparison of land-use effects on stream metabolism. Freshwater Biology 55: 1874-1890.

Bernsten R, Snapp SS. 2009. Sustainable agricultural development in developing countries. Pages 95-122 in Phoenix LE, ed. Critical Food Issues: Problems and State-of-The-Arts Worldwide., vol. 1. Santa Barbara, CA: Praeger.

Bhardwaj AK, Zenone T, Jasrotia P, Robertson GP, Chen J, Hamilton SK. 2010. Water and energy footprints of bioenergy crop production on marginal lands. Global Change Biology Bioenergy 3: 208-222.

Bhardwaj AK, Jasrotia P, Hamilton SK, Robertson GP. 2011. Ecological management of intensively cropped agro-ecosystems improves soil quality with sustained productivity. Agriculture, Ecosystems and Environment 140: 419-429.

Bird GW, Berney MF. 1998. Pest ecology and management. Pages 54-58 in Cavigelli MA DS, Probyn LK, Harwood RR, ed. Michigan Field Crop Ecology, vol. E-2646. East Lansing, MI: Michigan State University Extension Bulletin

Bird GW, Berney MF, Cavigelli MA. 1998. Soil ecology. Pages 12-16 in Cavigelli M.A. DSR, Probyn L.K., Harwood R.R., ed. Michigan Field Crop Ecology, vol. E-2646. East Lansing, MI: Michigan State University Extension Bulletin.

Bird GW. 2000. Nematodes and soil quality. Pages 84-94 in Probyn L.K. CMA, Mutch D.R., ed. Michigan Field Crop Pest Ecology and Management, vol. E-2704. East Lansing, MI: Michigan State University Extension Bulletin.

Bird GW, Fisk JW. 2000. Standards, technology, institutions, and economics of organic farming in the USA. Pages 213-228. Proceedings of the International Seminar on Development of Agribusiness and its Impact on Agriculture Production in Southeast Asia. Tokyo, Japan: Tokyo University of Agriculture.

Bird GW. 2001. Patterns of agricultural sustainability. Pages 101-106. Sustainable Agriculture: Possibility and Direction, 2nd Asia-Pacific Conference on Sustainable Agriculture. Bankok, Thailand: Thailand national Science and Technology Development Agency.

—. 2003. Role of integrated pest management and sustainable development. Pages 73-85 in Maredia KS DD, Mota-Sanchez D,, ed. Integrated Pest Management in the Global Arena. Cambridge, Massachusetts, USA: CABI Publishing.

Bird GW, Harwood RR, Sanchez JE, Berney MF, Smeenk J, Smith JJ. 2004. Role of nematodes in nutrient cycling. Phytopathology 94: 129.

Bird GW, Brewer MJ. 2006. Innovative integrated pest management for sustainable systems. Pages 25-49 in Francis CR PC, Bird GW, ed. Developing and Extending Sustainable Agriculture: A New Social Contract. Binghampton, New York, USA: Haworth Press.

Birdsley J. 2002. Phylogeny of the tyrant flycatchers…. Auk 119: 715-734.

Birge HE, Conant RT, Follett RF, Haddix ML, Morris SJ, Snapp SS, Wallenstein MD, Paul EA. 2015. Soil respiration is not limited by reductions in microbial biomass during long-term soil incubations . Soil Biology & Biochemistry 8:304-310.

Blackwood CB, Marsh T, Kim SH, Paul EA. 2003. Terminal restriction fragment length polymorphism data analysis for quantitative comparison of microbial communities. Applied and Environmental Microbiology 69: 926-932.

Blackwood CB, Paul EA. 2003. Eubacterial community structure and population size within the soil light fraction, rhizosphere, and heavy fraction of several agricultural systems. Soil Biology and Biochemistry 35: 1245-1255.

Blackwood CB, Dell CJ, Smucker AJ, Paul EA. 2006. Eubacterial communities in different soil macroaggregate environments and cropping systems. Soil Biology and Biochemistry 38: 720-728.

Blankespoor HD. 1981. What you should know about Swimmers’ Itch. Holland, Michigan, USA: H. Blankespoor.

Blankespoor HD, Wittrock DD, Aho J, Esch GW. 1982. Host-parasite interface of the fluke Collyriclum faba (Bremser in Schmalz, 1831) as revealed by light and electron microscopy. Zeitschrift fur Parasitenkunde 69: 191-199.

Blankespoor HD, Esch GW, Johnson WC. 1985. Some observations on the biology of Collyriclum faba (Bremser in Schmalz, 1831). Journal of Parasitology 71: 469-471.

Boling RHJ, Goodman ED, VanSickle JA, Zimmer JO, Cummins KW, Petersen RC, Reice SR. 1975. Toward a model of detritus processing in a woodland stream. Ecology 56: 141-151.

Bonachela, JA, Klausmeier, CA, Edwards, KF, Litchman, E, Levin, SA. 2016.  Advances in Plankton Modelling and Biodiversity Evaluation REVIEW The role of phytoplankton diversity in the emergent oceanic stoichiometry. Journal of Plankton Research. 38: 1021-1035.

Boon JJ, Wetzel RG, Godshalk GL. 1982. Pyrolysis mass spectrometry of some Scirpus species and their decomposition products. Limnology and Oceanography 27: 839-848.

Boon JJ, Windig JW, Wetzel RG, Godshalk GL. 1983. Analytical pyrolysis of particulate residues of decomposing Myriophyllum heterophyllum. Aquatic Botany 15: 307-320.

Bossart JL, Scriber JM. 1995. Maintenance of ecologically significant genetic variation in the tiger swallowtail butterfly through differential selection and gene flow. Evolution 49: 1163-1171.

—. 1995. Genetic variation in oviposition preferences in a tiger swallowtail butterfly: interspecific, interpopulation, and interindividual comparisons. Pages 183-193 in Scriber JM TY, Lederhouse RC, ed. The Swallowtail Butterflies: Their Ecology and Evolutionary Biology. Gainsville, Florida, USA: Scientific Publishers, Inc.

Boyd PW, TA Rynearson, EA Armstrong, F-X Fu, K Hayashi, Z Hu, DA Hutchins, RM Kudela, E Litchman, MR Mulholland, U Passow, RF Strzepek, KA Whittaker, E Yu and MK Thomas. 2013. Marine phytoplankton temperature versus growth responses from polar to tropical waters – outcome of a scientific community-wide study. PLoS ONE 8 (5): e63091.

Bradshaw L, Goldberg DE. 1989. Resource levels in undisturbed vegetation and mole mounds in old fields. American Midland Naturalist 121: 176-183.

Bradshaw HD, Schemske DW. 2003. Allele substitution at a flower colour locus produces a pollinator shift in monkeyflowers. Nature 426: 176-178.

Brammer ES, Wetzel RG. 1984. Uptake and release of K+, Na+, and Ca2+ by the water soldier, Stratiotes aloides L. Aquatic Botany 19: 119-130.

Brassil CE. 2006. Can environmental variation generate positive indirect effects in a model of shared predation? American Naturalist 167: 43-54.

Broughton LC, Gross. KL. 2000. Patterns of diversity in plant and soil microbial communities along a productivity gradient in a Michigan old-field. Oecologia 125: 420-427.

Brown JM, Wilson DS. 1992. Local specialization of phoretic mites on sympatric carrion beetle hosts. Ecology 73: 463-478.

—. 1994. Poecilochirus carabi: behavioral and life-history adaptations to different hosts and the consequences of geographical shifts in host communities. Pages 1-22 in Houck MA, ed. Mites: Ecological and Evolutionary Analyses of Life-history Patterns. New York, N.Y., USA: Chapman & Hall.

Bruesewitz DA, Tank JL, Hamilton SK. 2009. Seasonal effects of zebra mussels on littoral nitrogen transformation rates in Gull Lake, Michigan, USA. Freshwater Biology 54: 1427-1443.

Bruesewitz D, Tank L, Hamilton S. 2012. Incorporating spatial variation of nitrification and denitrification rates into whole-lake nitrogen dynamics. Journal of Geophysical Research:Biogeosciences 117.

Bruns MA, Fries MA, Tiedje JM, Paul EA. 1998. Functional gene hybridization patterns of terrestrial ammonia-oxidizing bacteria. Microbial Ecology 36: 293-302.

Bruns MA, Stephen JR, Prosser JI, Paul EA. 1999. Comparative diversity of ammonia-oxidizer 16S rRNA gene sequences in native, tilled, and successional soils. Applied and Environmental Microbiology 65: 2994-3000.

Buckley DH, Graber JR, Schmidt TM. 1998. Phylogenetic analysis of nonthermophilic members of the Kingdom (Crenarachaeota) and their diversity and abundance in soils. Applied and Environmental Microbiology 64: 4333-4339.

Buckley DH, Schmidt TM. 2001. Environmental factors influencing the distribution of rRNA from Verrucomicrobia in soil. FEMS Microbial Ecology 35: 105-112.

—. 2001. The structure of microbial communities in soil and the lasting impact of cultivation. Microbial Ecology 42: 11-21.

—. 2002. Exploring the diversity of soil – a microbial rainforest. Pages 183-208 in Staley JT RA, ed. Biodiversity of Microbial Life: Foundation of Earth’s Biosphere. New York, New York, USA: Wiley.

—. 2003. Diversity and dynamics of microbial communities in soils from agroecosystems. Environmental Microbiology 5: 441-452.

Bunn SE, Thoms MC, Hamilton SK, Capon SJ. 2006. Flow variability in dryland rivers: Boom, bust and the bits in between. River Research and Applications 22: 179-186.

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Burgin AJ, Yang WH, Hamilton SK, Silver WL. 2011. Beyond carbon and nitrogen: how the microbial energy economy couples elemental cycles in diverse ecosystems. Frontiers in Ecology and the Environment 9: 44-52.

Burgin AJ, Hamilton SK, Jones SE, Lennon JT. 2012. Denitrification by sulfur-oxidizing bacteria in a eutrophic lake. Aquatic Microbial Ecology 66: 283-293.

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Cáceres CE, Tessier AJ. 2003. How long to rest: the ecology of optimal dormancy and environmental constraint. Ecology 84: 1189-1198.

—. 2004. To sink or swim: Variable diapause strategies among Daphnia species. Limnology and Oceanography 49: 1333-1340.

—. 2004. Incidence of diapause varies among populations of Daphnia pulicaria. Oecologia 141: 425-431.

Cáceres CE, Hall SR, Duffy MA, Tessier AJ, Helmle C, MacIntyre S. 2006. Physical structure of lakes constrains epidemics in Daphnia populations. Ecology 87: 1438-1444.

Cáceres CE, Christoff AN, Boeing WJ. 2007. Variation in ephippial buoyancy in Daphnia pulicaria. . Freshwater Biology 52: 313-318.

Cáceres CE, Tessier AJ, Andreou A, Duffy MA. 2008. Stoichiometric relationships in vernal pond plankton communities. Freshwater Biology 53: 1291-1302.

Cáceres CE, Hartway C, Paczolt KA. 2009. Inbreeding depression varies with investment in sex in a facultative parthenogen. Evolution 63: 2474-2480

Cáceres CE, Knight CJ, Hall SR. 2009. Predator-spreaders: Predation can enhance parasite success in a planktonic host-parasite system. . Ecology 90: 2850-2858.

Caldeira K, Morgan MG, Baldocchi D, Brewer PG, Chen CTA, Nabuurs G-J, N.Nakicenovic, Robertson GP. 2004. A portfolio of carbon management options. Pages 103-130 in Field CB, Raupach MR, eds. The Global Carbon Cycle: Intergrating Humans, Climate, and the Natural World. New York, New York,: Island Press.

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Caldwell DE, Caldwell SJ, Tiedje JM. 1975. An ecological study of the sulfur-oxidizing bacteria from the littoral zone of a Michigan lake and a sulfur spring in Florida. Plant and Soil 43: 101-114.

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