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Aanderud ZT, Shuldman MI, Drenovsky RE, Richards JH. 2008. Shrub-interspace dynamics alter relationships between microbial community composition and belowground ecosystem characteristics. Soil biology & Biochemistry 40: 2206-2216.

Aanderud ZT, Schoolmaster DR, Lennon JT. 2011. Plants Mediate the Sensitivity of Soil Respiration to Rainfall Variability. Ecosystems 14: 156-167.

Aanderud ZT, Lennon JT. 2011. Validation of Heavy-Water Stable Isotope Probing for the Characterization of Rapidly Responding Soil Bacteria. Applied and Environmental Microbiology 77: 4589-4596.

Aanderud, ZT, Jones SE, Schoolmaster DR, Fierer N, Lennon JT. 2013. Sensitivity of soil respiration and microbial communities to altered snowfall. Soil Biology & Biochemistry 57: 217-227.

Agrawal AA, Conner JK, Johnson MTJ, Wallsgrove R. 2002. Ecological genetics of an induced plant defense against herbivores: Additive genetic variance and costs of phenotypic plasticity. Evolution 56: 2206-2213.

Agrawal AA, Kosola KR, Parry D. 2002. Gypsy moth defoliation and N fertilization affect hybrid poplar regeneration following coppicing. Canadian Journal of Forest Research 32: 1491-1495.

Agrawal AA, Conner J, Stinchcombe J. 2004. Evolution of plant resistance and tolerance to frost damage. Ecology Letters 7: 1199-1208.

Agrawal AA, et al. 2007. Filling key gaps in population and community ecology. . Frontiers in Ecology and the Environment 5: 145-152.

Aiken RM, Smucker AJM. 1996. Root system regulation of whole plant growth. Annual Review Phytopathology 34: 325-347.

Akinnifesi FK, Smucker AJM, Kang BT. 1999. Below-ground dynamics in agroforestry systems. Annals of Arid Zone 38: 239-273.

Allen HL. 1967. Acetate utilization by heterotrophic bacteria in a pond. Hidrologiai Kozlony 7: 295-297.

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—. 1971. Primary productivity, chemo-organotrophy, and nutritional interactions of epiphytic algae and bacteria on macrophytes in the littoral of a lake. Ecological Monographs 41: 97-127.

Allen MR. 2010. Genetic and environmental factors influence survival and hatching of diapausing eggs. Limnology and Oceanography 55: 549-559.

Ambus P, Christensen S. 1995. Spatial and seasonal nitrous oxide and methane fluxes in Danish forest-, grassland-, and agroecosystems. Journal of Environmental Quality 24: 993-1001.

Ambus P, Robertson GP. 1998. Automated near-continuous measurement of carbon dioxide and nitrous oxide fluxes from soil. Soil Science Society of America 62: 394-400.

—. 1999. Fluxes of CH4 and N2O in aspen stands grown under ambient and twice-ambient CO2. Plant and Soil 209: 1-8.

Ambus P, Jensen ES, Robertson GP. 2001. Nitrous oxide and N-leaching losses from agricultural soil: influence of crop residue particle size, quality and placement. Phyton -Annales Rei Botanicae 41: 7-15.

Ambus P, Robertson GP. 2006. The Effect of increased N deposition on nitrous oxide, methane, and carbon dioxide fluxes from unmanaged forest and grassland communities in Michigan. Biogeochemistry 79: 315-337.

Angert AL, Bradshaw HD, Schemske DW. 2008. Using experimental evolution to investigate geographic range limits in monkeyflowers. Evolution 62: 2660-2675.

Annett CS, D'Itri FM. 1978. Mercury in fish and sediments in two eutrophic Michigan lakes with respect to time and urbanization. Pages 866-878 in Adriano DC, Brisbin IL, eds. Environmental Chemistry and Cycling Processes, vol. 45. Augusta, Georgia, USA: Savannah River Ecology Laboratory, Institute of Ecology, University of Georgia, Division of Biomedical and Environmental Research, Energy Research and Development Administration.

Arango CP, Tank JL, Johnson LT, Hamilton SK. 2008. Assimilatory uptake rather than nitrification and denitrification determines nitrogen removal patterns in streams of varying land use. Limnology and Oceanography 53: 2558-2572.

Ayres MP, Scriber JM. 1994. Local adaptations to regional climates in Papillo Canadersis Lepidoptera: Papollionidae. Ecological Monographs 64: 465-482.

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Bachmann MD, Carlton RG, Burkholder JM, Wetzel RG. 1986. Symbiosis between salamander eggs and green algae: microelectrode measurements inside eggs demonstrate effect of photosynthesis on oxygen concentration. Canadian Journal of Zoology 64: 1586-1588.

Baird IE, Wetzel RG. 1968. A method for the determination of zero thickness activity of 14C labeled benthic diatoms in sand. Limnology and Oceanography 13: 379-382.

Ball BA, et al. 2010. Direct and Terrestrial Vegetation-mediated Effects of Environmental Change on Aquatic Ecosystem Processes. Bioscience 60: 590-601.

Ballare, CL, Gross KL, Monson RK. 2013. Zooming in on plant interactions. Oecologia 171: 601-603.

Banovetz SJ, Scheiner SM. 1994. Effects of seed mass on the seed ecology of Coreopsis lanceolata. American Midland Naturalist 131: 65-74.

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Barko JW, Murphy PG, Wetzel RG. 1977. Investigation of primary production and ecosystem metabolism in a Lake Michigan dune pond. Archiv fur Hydrobiologie 81: 155-187.

Barnes JR, Ovink R, Cummins KW. 1978. Leaf litter processing in Gull Lake, Michigan, U.S.A. Verhandlungen. Internationale Vereinigung fur Theoretische und Angewandte Limnologie 20: 475-479.

Barton AD, AJ Pershing, E Litchman, NR Record, KF Edwards, ZV Finkel, T Kiørboe and BA Ward. 2013. The biogeography of marine plankton traits. Ecology Letters 16: 522-534.

Basso B, Ritchie JT. 2005. Impact of compost, manure and inorganic fertilizer on nitrate leaching and yield for a 6-year maize -alfalfa rotation in Michigan. Agriculture Ecosystems, and the Environment 108: 329-341.

Basso B, Gargiulo O, Paustian K, Robertson GP, Porter C, Grace PR, Jones JW. 2011. Procedures for Initializing Soil Organic Carbon Pools in the DSSAT-CENTURY Model for Agricultural Systems. Soil Science Society of American Journal 75: 69-78.

Beaulieu JJ, Arango CP, Hamilton SK, Tank JL. 2008. The production and emission of nitrous oxide from headwater streams in the midwestern United States. Global Change Biology 14: 878-894.

Beaulieu JJ, et al. 2011. Nitrous oxide emission from denitrification in stream and river networks. Proceedings of the National Academy of Sciences of the United States of America 108: 214-219

Becker C, Boersma M. 2007. Effects of essential fatty acids on the reproduction of a generalist herbivore. Journal of Plankton Research 29: 463-470.

Beedy TL, Snapp SS, Akinnifesi FK, Sileshi GW. 2010. Impact of Gliricidia sepium intercropping on soil organic matter fractions in a maize-based cropping system. Agriculture, Ecosystems & Environment. 138: 139-146.

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Beer S, Stewart AJ, Wetzel RG. 1982. Measuring chlorophyll a and 14C-labeled photosynthate in aquatic angiosperms by the use of a tissue solubilizer. Plant Physiology 69: 54-57.

Beer S, Wetzel RG. 1982. Photosynthetic carbon fixation pathways in Zostera marina and three Florida seagrasses. Aquatic Botany 13: 141-146.

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Bergsma TT, Bergsma QC, Ostrom NE, Robertson GP. 1999. A heuristic model for the calculation of dinitrogen and nitrous oxide flux for 15N-labeled soil. Soil Science Society of America Journal 63: 1709- 1716.

Bergsma TT, Ostrom NE, Emmons M, Robertson GP. 2001. Measuring simultaneous fluxes from soil of N2O and N2 in the field using the 15N-Gas "Nonequilibrium" technique. Environmental Science and Technology 35: 4307-4312.

Bergsma TT, Robertson GP, Ostrom NE. 2002. Influence of soil moisture and land use history on denitrification end-products. Journal of Environmental Quality 31: 711-717.

Berney MF, Bird GW. 1998. Nematodes. Pages 71-79 in Cavigelli M.A. DSR, Probyn L.K., Harwood R.R., ed. Michigan Field Crop Ecology, vol. E-2646. East Lansing, MI: Michigan State University Extension Bulletin.

Bernot MJ, et al. 2010. Inter-regional comparison of land-use effects on stream metabolism. Freshwater Biology 55: 1874-1890.

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Bhardwaj AK, Zenone T, Jasrotia P, Robertson GP, Chen J, Hamilton SK. 2010. Water and energy footprints of bioenergy crop production on marginal lands. Global Change Biology Bioenergy 3: 208-222.

Bhardwaj AK, Jasrotia P, Hamilton SK, Robertson GP. 2011. Ecological management of intensively cropped agro-ecosystems improves soil quality with sustained productivity. Agriculture, Ecosystems and Environment 140: 419-429.

Bird GW, Berney MF. 1998. Pest ecology and management. Pages 54-58 in Cavigelli MA DS, Probyn LK, Harwood RR, ed. Michigan Field Crop Ecology, vol. E-2646. East Lansing, MI: Michigan State University Extension Bulletin

Bird GW, Berney MF, Cavigelli MA. 1998. Soil ecology. Pages 12-16 in Cavigelli M.A. DSR, Probyn L.K., Harwood R.R., ed. Michigan Field Crop Ecology, vol. E-2646. East Lansing, MI: Michigan State University Extension Bulletin.

Bird GW. 2000. Nematodes and soil quality. Pages 84-94 in Probyn L.K. CMA, Mutch D.R., ed. Michigan Field Crop Pest Ecology and Management, vol. E-2704. East Lansing, MI: Michigan State University Extension Bulletin.

Bird GW, Fisk JW. 2000. Standards, technology, institutions, and economics of organic farming in the USA. Pages 213-228. Proceedings of the International Seminar on Development of Agribusiness and its Impact on Agriculture Production in Southeast Asia. Tokyo, Japan: Tokyo University of Agriculture.

Bird GW. 2001. Patterns of agricultural sustainability. Pages 101-106. Sustainable Agriculture: Possibility and Direction, 2nd Asia-Pacific Conference on Sustainable Agriculture. Bankok, Thailand: Thailand national Science and Technology Development Agency.

—. 2003. Role of integrated pest management and sustainable development. Pages 73-85 in Maredia KS DD, Mota-Sanchez D,, ed. Integrated Pest Management in the Global Arena. Cambridge, Massachusetts, USA: CABI Publishing.

Bird GW, Harwood RR, Sanchez JE, Berney MF, Smeenk J, Smith JJ. 2004. Role of nematodes in nutrient cycling. Phytopathology 94: 129.

Bird GW, Brewer MJ. 2006. Innovative integrated pest management for sustainable systems. Pages 25-49 in Francis CR PC, Bird GW, ed. Developing and Extending Sustainable Agriculture: A New Social Contract. Binghampton, New York, USA: Haworth Press.

Birdsley J. 2002. Phylogeny of the tyrant flycatchers…. Auk 119: 715-734.

Blackwood CB, Marsh T, Kim SH, Paul EA. 2003. Terminal restriction fragment length polymorphism data analysis for quantitative comparison of microbial communities. Applied and Environmental Microbiology 69: 926-932.

Blackwood CB, Paul EA. 2003. Eubacterial community structure and population size within the soil light fraction, rhizosphere, and heavy fraction of several agricultural systems. Soil Biology and Biochemistry 35: 1245-1255.

Blackwood CB, Dell CJ, Smucker AJ, Paul EA. 2006. Eubacterial communities in different soil macroaggregate environments and cropping systems. Soil Biology and Biochemistry 38: 720-728.

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Blankespoor HD, Wittrock DD, Aho J, Esch GW. 1982. Host-parasite interface of the fluke Collyriclum faba (Bremser in Schmalz, 1831) as revealed by light and electron microscopy. Zeitschrift fur Parasitenkunde 69: 191-199.

Blankespoor HD, Esch GW, Johnson WC. 1985. Some observations on the biology of Collyriclum faba (Bremser in Schmalz, 1831). Journal of Parasitology 71: 469-471.

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Boon JJ, Wetzel RG, Godshalk GL. 1982. Pyrolysis mass spectrometry of some Scirpus species and their decomposition products. Limnology and Oceanography 27: 839-848.

Boon JJ, Windig JW, Wetzel RG, Godshalk GL. 1983. Analytical pyrolysis of particulate residues of decomposing Myriophyllum heterophyllum. Aquatic Botany 15: 307-320.

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Boyd PW, TA Rynearson, EA Armstrong, F-X Fu, K Hayashi, Z Hu, DA Hutchins, RM Kudela, E Litchman, MR Mulholland, U Passow, RF Strzepek, KA Whittaker, E Yu and MK Thomas. 2013. Marine phytoplankton temperature versus growth responses from polar to tropical waters - outcome of a scientific community-wide study. PLoS ONE 8 (5): e63091.

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Bradshaw HD, Schemske DW. 2003. Allele substitution at a flower colour locus produces a pollinator shift in monkeyflowers. Nature 426: 176-178.

Brammer ES, Wetzel RG. 1984. Uptake and release of K+, Na+, and Ca2+ by the water soldier, Stratiotes aloides L. Aquatic Botany 19: 119-130.

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Broughton LC, Gross. KL. 2000. Patterns of diversity in plant and soil microbial communities along a productivity gradient in a Michigan old-field. Oecologia 125: 420-427.

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Bruesewitz DA, Tank JL, Hamilton SK. 2009. Seasonal effects of zebra mussels on littoral nitrogen transformation rates in Gull Lake, Michigan, USA. Freshwater Biology 54: 1427-1443.

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Bruns MA, Stephen JR, Prosser JI, Paul EA. 1999. Comparative diversity of ammonia-oxidizer 16S rRNA gene sequences in native, tilled, and successional soils. Applied and Environmental Microbiology 65: 2994-3000.

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Buckley DH, Schmidt TM. 2001. Environmental factors influencing the distribution of rRNA from Verrucomicrobia in soil. FEMS Microbial Ecology 35: 105-112.

—. 2001. The structure of microbial communities in soil and the lasting impact of cultivation. Microbial Ecology 42: 11-21.

—. 2002. Exploring the diversity of soil - a microbial rainforest. Pages 183-208 in Staley JT RA, ed. Biodiversity of Microbial Life: Foundation of Earth's Biosphere. New York, New York, USA: Wiley.

—. 2003. Diversity and dynamics of microbial communities in soils from agroecosystems. Environmental Microbiology 5: 441-452.

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Burgin AJ, Yang WH, Hamilton SK, Silver WL. 2011. Beyond carbon and nitrogen: how the microbial energy economy couples elemental cycles in diverse ecosystems. Frontiers in Ecology and the Environment 9: 44-52.

Burgin AJ, Hamilton SK, Jones SE, Lennon JT. 2012. Denitrification by sulfur-oxidizing bacteria in a eutrophic lake. Aquatic Microbial Ecology 66: 283-293.

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Cáceres CE, Tessier AJ. 2003. How long to rest:  the ecology of optimal dormancy and environmental constraint. Ecology 84: 1189-1198.

—. 2004. To sink or swim: Variable diapause strategies among Daphnia species. Limnology and Oceanography 49: 1333-1340.

—. 2004. Incidence of diapause varies among populations of Daphnia pulicaria. Oecologia 141: 425-431.

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Cavigelli MA, Robertson GP. 2000. The functional significance of denitrifier community composistion in a terrestrial ecosystem. Ecology 81: 1402-1414.

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Cavigelli MA, Robertson GP. 2001. Role of denitrifier diversity in rates of nitrous oxide consumption in a terrestrial ecosystem. Soil Biology and Biochemistry 33: 297-310.

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Clark CM, Cleland EE, Collins SL, Fargione JE, Gough L, Gross KL, Pennings SC, Suding KN, Grace JB. 2007. Environmental and plant community determinants of species loss following nitrogen enrichment. Ecology Letters 10: 596-607.

Cleland EE, C. Clark, S. Collins, J. Fargione, L. Gough, K. L. Gross, D. G. Milchunas, S. Pennings, W. D. Bowman, I. C. Burke, W. K. Lauenroth, G. P. Robertson, J. Simpson, D. Tilman, and K. N. Suding. 2008.  Ecology 89: p. 1175. 2008. Species responses to nitrogen fertilization in herbaceous plant communities and associated species traits (Data Paper). Ecology 89: 1175.

Cleland EE, Clark CM, Collins SL, Fargione JE, Gough L, Gross KL, Pennings SC, Suding KN. 2011. Patterns of trait convergence and divergence among native and exotic species in herbaceous plant communities are not modified by nitrogen enrichment. Journal of Ecology 99: 1327-1338.

Cleland EE, Collins, SL, Dickson, TL, Farrer, EC, Gross, KL, Gherardi, LA, Hallett, LM, Hobbs, RJ, Hsu, JS, Turnbull, L, Suding, KN. 2013. Sensitivity of grassland plant community composition to spatial vs. temporal variation in precipitation. Ecology 94: 1687-1696.

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Haack SK, Garchow H, Odelson DA, Forney LJ, Klug MJ. 1994. Accuracy, reproducibility, and interpretation of fatty acid methyl ester profiles of model bacterial communities. Applied and Environmental Microbiology 60: 2483-2493.

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Hall DJ, Werner EE, Gilliam JF, Mittelbach GG, Howard D, Doner GG, Dickerman JA, Stewart AJ. 1979. Diel foraging behavior and prey selection in the golden shiner Notemigonus crysoleucas. Journal of the Fisheries Research Board of Canada 36: 1029-1039.

Hall DJ, Ehlinger TJ. 1989. Perturbation, planktivory and pelagic community structure: the consequence of winterkill in a small lake. Canadian Journal of Fisheries and Aquatic Sciences 46: 2203-2209.

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Hall SR. 2004. Stoichiometrically-explicit competition between grazers: species replacement, coexistence, and priority effects along resource supply gradients. American Naturalist 164: 157-172.

Hall SR, Duffy MA, Cáceres CE. 2005. Selective predation and productivity jointly drive complex behavior in host-parasite systems. American Naturalist 165: 70-81.

Hall SR, Duffy MA, Tessier AJ, Cceres CE. 2005. Spatial heterogeneity of daphniid parasitism within lakes. Oecologia 143: 635-644.

Hall SR, Smith VH, Lytle DA, Leibold MA. 2005. Constraints on primary producer N:P stoichiometry along N:P supply ratio gradients. Ecology 86: 1894-1904.

Hall SR, Leibold MA, Lytle DA, Smith VH. 2006. Inedible producers in food webs: Controls on stoichiometric food quality and composition of grazers. American Naturalist 167: 628-637.

Hall SR, Tessier AJ, Duffy MA, Huebner M, Cáceres CE. 2006. Warmer does not have to mean sicker: temperature and predators can jointly drive timing of epidemics. Ecology 87: 1684-1695.

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Hall RJ, et al. 2009. Nitrate removal in stream ecosystems measured by N-15 addition experiments: Total uptake. Limnology and Oceanography 54: 653-665

Hall SR, Smyth R, Becker CR, Duffy MA, Knight CJ, MacIntyre S, Tessier AJ, Cáceres CE. 2010. Why are Daphnia in some lakes sicker? Disease ecology, habitat structure and the plankton. BioScience 60: 363-375.

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Hall SR, Becker CR, Duffy MA, Cáceres CE. 2011. Epidemic size determines population-level effects of fungal parasites on Daphnia hosts. Oecologia 166: 833-842.

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Hamilton SK, Sippel SJ, Melack JM. 1996. Inundation patterns in the Pantanal wetland of South America determined from passive microwave remote sensing. Archiv fur Hydrobiologie 137: 1-28.

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