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Aanderud ZT, Shuldman MI, Drenovsky RE, Richards JH. 2008. Shrub-interspace dynamics alter relationships between microbial community composition and belowground ecosystem characteristics. Soil biology & Biochemistry 40: 2206-2216.

Aanderud ZT, Schoolmaster DR, Lennon JT. 2011. Plants Mediate the Sensitivity of Soil Respiration to Rainfall Variability. Ecosystems 14: 156-167.

Aanderud ZT, Lennon JT. 2011. Validation of Heavy-Water Stable Isotope Probing for the Characterization of Rapidly Responding Soil Bacteria. Applied and Environmental Microbiology 77: 4589-4596.

Agrawal AA, Conner JK, Johnson MTJ, Wallsgrove R. 2002. Ecological genetics of an induced plant defense against herbivores: Additive genetic variance and costs of phenotypic plasticity. Evolution 56: 2206-2213.

Agrawal AA, Kosola KR, Parry D. 2002. Gypsy moth defoliation and N fertilization affect hybrid poplar regeneration following coppicing. Canadian Journal of Forest Research 32: 1491-1495.

Agrawal AA, Conner J, Stinchcombe J. 2004. Evolution of plant resistance and tolerance to frost damage. Ecology Letters 7: 1199-1208.

Agrawal AA, et al. 2007. Filling key gaps in population and community ecology. . Frontiers in Ecology and the Environment 5: 145-152.

Aiken RM, Smucker AJM. 1996. Root system regulation of whole plant growth. Annual Review Phytopathology 34: 325-347.

Akinnifesi FK, Smucker AJM, Kang BT. 1999. Below-ground dynamics in agroforestry systems. Annals of Arid Zone 38: 239-273.

Allen HL. 1967. Acetate utilization by heterotrophic bacteria in a pond. Hidrologiai Kozlony 7: 295-297.

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Allen MR. 2010. Genetic and environmental factors influence survival and hatching of diapausing eggs. Limnology and Oceanography 55: 549-559.

Ambus P, Christensen S. 1995. Spatial and seasonal nitrous oxide and methane fluxes in Danish forest-, grassland-, and agroecosystems. Journal of Environmental Quality 24: 993-1001.

Ambus P, Robertson GP. 1998. Automated near-continuous measurement of carbon dioxide and nitrous oxide fluxes from soil. Soil Science Society of America 62: 394-400.

—. 1999. Fluxes of CH4 and N2O in aspen stands grown under ambient and twice-ambient CO2. Plant and Soil 209: 1-8.

Ambus P, Jensen ES, Robertson GP. 2001. Nitrous oxide and N-leaching losses from agricultural soil: influence of crop residue particle size, quality and placement. Phyton -Annales Rei Botanicae 41: 7-15.

Ambus P, Robertson GP. 2006. The Effect of increased N deposition on nitrous oxide, methane, and carbon dioxide fluxes from unmanaged forest and grassland communities in Michigan. Biogeochemistry 79: 315-337.

Angert AL, Bradshaw HD, Schemske DW. 2008. Using experimental evolution to investigate geographic range limits in monkeyflowers. Evolution 62: 2660-2675.

Annett CS, D'Itri FM. 1978. Mercury in fish and sediments in two eutrophic Michigan lakes with respect to time and urbanization. Pages 866-878 in Adriano DC, Brisbin IL, eds. Environmental Chemistry and Cycling Processes, vol. 45. Augusta, Georgia, USA: Savannah River Ecology Laboratory, Institute of Ecology, University of Georgia, Division of Biomedical and Environmental Research, Energy Research and Development Administration.

Arango CP, Tank JL, Johnson LT, Hamilton SK. 2008. Assimilatory uptake rather than nitrification and denitrification determines nitrogen removal patterns in streams of varying land use. Limnology and Oceanography 53: 2558-2572.

Ayres MP, Scriber JM. 1994. Local adaptations to regional climates in Papillo Canadersis Lepidoptera: Papollionidae. Ecological Monographs 64: 465-482.

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Bachmann MD, Carlton RG, Burkholder JM, Wetzel RG. 1986. Symbiosis between salamander eggs and green algae: microelectrode measurements inside eggs demonstrate effect of photosynthesis on oxygen concentration. Canadian Journal of Zoology 64: 1586-1588.

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Barton AD, AJ Pershing, E Litchman, NR Record, KF Edwards, ZV Finkel, T Kiørboe and BA Ward. 2013. The biogeography of marine plankton traits. Ecology Letters 16: 522-534.

Basso B, Ritchie JT. 2005. Impact of compost, manure and inorganic fertilizer on nitrate leaching and yield for a 6-year maize -alfalfa rotation in Michigan. Agriculture Ecosystems, and the Environment 108: 329-341.

Basso B, Gargiulo O, Paustian K, Robertson GP, Porter C, Grace PR, Jones JW. 2011. Procedures for Initializing Soil Organic Carbon Pools in the DSSAT-CENTURY Model for Agricultural Systems. Soil Science Society of American Journal 75: 69-78.

Beaulieu JJ, Arango CP, Hamilton SK, Tank JL. 2008. The production and emission of nitrous oxide from headwater streams in the midwestern United States. Global Change Biology 14: 878-894.

Beaulieu JJ, et al. 2011. Nitrous oxide emission from denitrification in stream and river networks. Proceedings of the National Academy of Sciences of the United States of America 108: 214-219

Becker C, Boersma M. 2007. Effects of essential fatty acids on the reproduction of a generalist herbivore. Journal of Plankton Research 29: 463-470.

Beedy TL, Snapp SS, Akinnifesi FK, Sileshi GW. 2010. Impact of Gliricidia sepium intercropping on soil organic matter fractions in a maize-based cropping system. Agriculture, Ecosystems & Environment. 138: 139-146.

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Beer S, Stewart AJ, Wetzel RG. 1982. Measuring chlorophyll a and 14C-labeled photosynthate in aquatic angiosperms by the use of a tissue solubilizer. Plant Physiology 69: 54-57.

Beer S, Wetzel RG. 1982. Photosynthetic carbon fixation pathways in Zostera marina and three Florida seagrasses. Aquatic Botany 13: 141-146.

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Bergsma TT, Bergsma QC, Ostrom NE, Robertson GP. 1999. A heuristic model for the calculation of dinitrogen and nitrous oxide flux for 15N-labeled soil. Soil Science Society of America Journal 63: 1709- 1716.

Bergsma TT, Ostrom NE, Emmons M, Robertson GP. 2001. Measuring simultaneous fluxes from soil of N2O and N2 in the field using the 15N-Gas "Nonequilibrium" technique. Environmental Science and Technology 35: 4307-4312.

Bergsma TT, Robertson GP, Ostrom NE. 2002. Influence of soil moisture and land use history on denitrification end-products. Journal of Environmental Quality 31: 711-717.

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Bhardwaj AK, Zenone T, Jasrotia P, Robertson GP, Chen J, Hamilton SK. 2010. Water and energy footprints of bioenergy crop production on marginal lands. Global Change Biology Bioenergy 3: 208-222.

Bhardwaj AK, Jasrotia P, Hamilton SK, Robertson GP. 2011. Ecological management of intensively cropped agro-ecosystems improves soil quality with sustained productivity. Agriculture, Ecosystems and Environment 140: 419-429.

Bird GW, Berney MF. 1998. Pest ecology and management. Pages 54-58 in Cavigelli MA DS, Probyn LK, Harwood RR, ed. Michigan Field Crop Ecology, vol. E-2646. East Lansing, MI: Michigan State University Extension Bulletin

Bird GW, Berney MF, Cavigelli MA. 1998. Soil ecology. Pages 12-16 in Cavigelli M.A. DSR, Probyn L.K., Harwood R.R., ed. Michigan Field Crop Ecology, vol. E-2646. East Lansing, MI: Michigan State University Extension Bulletin.

Bird GW. 2000. Nematodes and soil quality. Pages 84-94 in Probyn L.K. CMA, Mutch D.R., ed. Michigan Field Crop Pest Ecology and Management, vol. E-2704. East Lansing, MI: Michigan State University Extension Bulletin.

Bird GW, Fisk JW. 2000. Standards, technology, institutions, and economics of organic farming in the USA. Pages 213-228. Proceedings of the International Seminar on Development of Agribusiness and its Impact on Agriculture Production in Southeast Asia. Tokyo, Japan: Tokyo University of Agriculture.

Bird GW. 2001. Patterns of agricultural sustainability. Pages 101-106. Sustainable Agriculture: Possibility and Direction, 2nd Asia-Pacific Conference on Sustainable Agriculture. Bankok, Thailand: Thailand national Science and Technology Development Agency.

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Bird GW, Harwood RR, Sanchez JE, Berney MF, Smeenk J, Smith JJ. 2004. Role of nematodes in nutrient cycling. Phytopathology 94: 129.

Bird GW, Brewer MJ. 2006. Innovative integrated pest management for sustainable systems. Pages 25-49 in Francis CR PC, Bird GW, ed. Developing and Extending Sustainable Agriculture: A New Social Contract. Binghampton, New York, USA: Haworth Press.

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Blackwood CB, Marsh T, Kim SH, Paul EA. 2003. Terminal restriction fragment length polymorphism data analysis for quantitative comparison of microbial communities. Applied and Environmental Microbiology 69: 926-932.

Blackwood CB, Paul EA. 2003. Eubacterial community structure and population size within the soil light fraction, rhizosphere, and heavy fraction of several agricultural systems. Soil Biology and Biochemistry 35: 1245-1255.

Blackwood CB, Dell CJ, Smucker AJ, Paul EA. 2006. Eubacterial communities in different soil macroaggregate environments and cropping systems. Soil Biology and Biochemistry 38: 720-728.

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Boon JJ, Windig JW, Wetzel RG, Godshalk GL. 1983. Analytical pyrolysis of particulate residues of decomposing Myriophyllum heterophyllum. Aquatic Botany 15: 307-320.

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Boyd PW, TA Rynearson, EA Armstrong, F-X Fu, K Hayashi, Z Hu, DA Hutchins, RM Kudela, E Litchman, MR Mulholland, U Passow, RF Strzepek, KA Whittaker, E Yu and MK Thomas. 2013. Marine phytoplankton temperature versus growth responses from polar to tropical waters - outcome of a scientific community-wide study. PLoS ONE 8 (5): e63091.

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Bradshaw HD, Schemske DW. 2003. Allele substitution at a flower colour locus produces a pollinator shift in monkeyflowers. Nature 426: 176-178.

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Broughton LC, Gross. KL. 2000. Patterns of diversity in plant and soil microbial communities along a productivity gradient in a Michigan old-field. Oecologia 125: 420-427.

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Bruesewitz DA, Tank JL, Hamilton SK. 2009. Seasonal effects of zebra mussels on littoral nitrogen transformation rates in Gull Lake, Michigan, USA. Freshwater Biology 54: 1427-1443.

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Bruns MA, Stephen JR, Prosser JI, Paul EA. 1999. Comparative diversity of ammonia-oxidizer 16S rRNA gene sequences in native, tilled, and successional soils. Applied and Environmental Microbiology 65: 2994-3000.

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Buckley DH, Schmidt TM. 2001. Environmental factors influencing the distribution of rRNA from Verrucomicrobia in soil. FEMS Microbial Ecology 35: 105-112.

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Burgin AJ, Yang WH, Hamilton SK, Silver WL. 2011. Beyond carbon and nitrogen: how the microbial energy economy couples elemental cycles in diverse ecosystems. Frontiers in Ecology and the Environment 9: 44-52.

Burgin AJ, Hamilton SK, Jones SE, Lennon JT. 2012. Denitrification by sulfur-oxidizing bacteria in a eutrophic lake. Aquatic Microbial Ecology 66: 283-293.

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Cáceres CE, Tessier AJ. 2003. How long to rest:  the ecology of optimal dormancy and environmental constraint. Ecology 84: 1189-1198.

—. 2004. To sink or swim: Variable diapause strategies among Daphnia species. Limnology and Oceanography 49: 1333-1340.

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Cleland EE, C. Clark, S. Collins, J. Fargione, L. Gough, K. L. Gross, D. G. Milchunas, S. Pennings, W. D. Bowman, I. C. Burke, W. K. Lauenroth, G. P. Robertson, J. Simpson, D. Tilman, and K. N. Suding. 2008.  Ecology 89: p. 1175. 2008. Species responses to nitrogen fertilization in herbaceous plant communities and associated species traits (Data Paper). Ecology 89: 1175.

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Cleland EE, Collins, SL, Dickson, TL, Farrer, EC, Gross, KL, Gherardi, LA, Hallett, LM, Hobbs, RJ, Hsu, JS, Turnbull, L, Suding, KN. 2013. Sensitivity of grassland plant community composition to spatial vs. temporal variation in precipitation. Ecology 94: 1687-1696.

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